BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003H11LP1|AL425206
(1015 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1672 1817 0.0
3x_Contig35 488 e-138
>3x_Contig1672
Length = 13609
Score = 1817 bits (916), Expect = 0.0
Identities = 956/963 (99%), Gaps = 6/963 (0%)
Strand = Plus / Plus
Query: 1 tttcactccacgaggaaatgatcacattcacacaaagccctcctaaccaagcttgggaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1446 tttcactccacgaggaaatgatcacattcacacaaagccctcctaaccaagcttgggaag 1505
Query: 61 caaaccacaccacggataagatagctctgataagaacaccaaaggatgacccacgcattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1506 caaaccacaccacggataagatagctctgataagaacaccaaaggatgacccacgcattc 1565
Query: 121 caaagatgatacgctggaacacagagtacccaatatggtactctgagccatacactgagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1566 caaagatgatacgctggaacacagagtacccaatatggtactctgagccatacactgagt 1625
Query: 181 tgatgatggctgcaatactgatgaagaaatttgccaaaacaatacatccaatggtttggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1626 tgatgatggctgcaatactgatgaagaaatttgccaaaacaatacatccaatggtttggc 1685
Query: 241 gaccattcatacccgaaagcgtcaattcaccatcagtgcccacatcgtacaacaacaacg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1686 gaccattcatacccgaaagcgtcaattcaccatcagtgcccacatcgtacaacaacaacg 1745
Query: 301 ctgacccaccagaccacgtactaatacacaaacaaagcaatgtccagtatgatgtaaaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1746 ctgacccaccagaccacgtactaatacacaaacaaagcaatgtccagtatgatgtaaaac 1805
Query: 361 catatataccccattttcttcttgaaacaggcataggaactaaatccttattactagttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1806 catatataccccattttcttcttgaaacaggcataggaactaaatccttattactagttc 1865
Query: 421 tgtcggattcatccaacaccaaaaggttgtgcaacttcccaagaaccccagccattacaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1866 tgtcggattcatccaacaccaaaaggttgtgcaacttcccaagaaccccagccattacaa 1925
Query: 481 actttcaacaatctttaaatcctggtgtttattgcactagttaaaacaatgcctatggag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1926 actttcaacaatctttaaatcctggtgtttattgcactagttaaaacaatgcctatggag 1985
Query: 541 cagccaagttaagtacgaacgaatacgatgcgaaaaacgcacaaaccttagtttatgtat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1986 cagccaagttaagtacgaacgaatacgatgcgaaaaacgcacaaaccttagtttatgtat 2045
Query: 601 cgtctagtatttatgaaaaagaacagtctattactgagatgagatgaaccgaattgaaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2046 cgtctagtatttatgaaaaagaacagtctattactgagatgagatgaaccgaattgaaaa 2105
Query: 661 agatatactaagatttgatacaaagattaggcaaaaacaaacatagaaatatattgtcca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2106 agatatactaagatttgatacaaagattaggcaaaaacaaacatagaaatatattgtcca 2165
Query: 721 ccaaaacaacaaacaaatgactacttttagtctgtgcccccgttcaatttcagaagtatt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2166 ccaaaacaacaaacaaatgactacttttagtctgtgcccccgttcaatttcagaagtatt 2225
Query: 781 aacggctgcatggtacaaaactcgagacatatacagaaccactaggagacccacagtttg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2226 aacggctgcatggtacaaaactcgagacatatacagaaccactaggagacccacagtttg 2285
Query: 841 taggcaaggctgcctttattcaaaggtaaacatttttcgaaggaataaag-aaaaaaatt 899
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2286 taggcaaggctgcctttattcaaaggtaaacatttttcgaaggaataaagaaaaaaaatt 2345
Query: 900 ttcacccaaa--gaacgga-cctctacggccgttaacag-aacaagca-ccgtctctgta 954
|||||||||| |||||| ||||||||||||||||||| |||||||| |||||||||||
Sbjct: 2346 ttcacccaaaagaaacggaccctctacggccgttaacagaaacaagcacccgtctctgta 2405
Query: 955 ggt 957
|||
Sbjct: 2406 ggt 2408
>3x_Contig35
Length = 604
Score = 488 bits (246), Expect = e-138
Identities = 352/386 (91%), Gaps = 1/386 (0%)
Strand = Plus / Plus
Query: 152 aatatggtactctgagccatacactgagttgatgatggctgcaatactgatgaagaaatt 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatatggtactctgagccatacactgagttgatgatggctgcaatactgatgaagaaatt 60
Query: 212 tgccaaaacaatacatccaatggtttggcgaccattcatacccgaaagcgtcaattcacc 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgccaaaacaatacatccaatggtttggcgaccattcatacccgaaagcgtcaattcacc 120
Query: 272 atcagtgcccacatcgtacaacaacaacgctgacccaccagaccacgtactaatacacaa 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atcagtgcccacatcgtacaacaacaacgctgacccaccagaccacgtactaatacacaa 180
Query: 332 acaaagcaatgtccagtatgatgtaaaaccatatataccccattttcttcttgaaacagg 391
||||| |||| |||| ||| || ||||||||||||||||||||||||||||| | |||
Sbjct: 181 acaaatcaatttccattattatttaaaaccatatataccccattttcttctttatacatt 240
Query: 392 cataggaactaaatccttattactagttc-tgtcggattcatccaacaccaaaaggttgt 450
||| ||||||||||||||||||| ||| | || ||||| |||||||||||| || |
Sbjct: 241 tatattaactaaatccttattactatttcttttcttattcaaccaacaccaaaatttttt 300
Query: 451 gcaacttcccaagaaccccagccattacaaactttcaacaatctttaaatcctggtgttt 510
||||||||||| ||||||| |||||||||||||||||||| || |||||||| | ||
Sbjct: 301 tcaacttcccaataaccccatccattacaaactttcaacaaactataaatccttttttta 360
Query: 511 attgcactagttaaaacaatgcctat 536
||| ||||| |||| ||||| |||||
Sbjct: 361 atttcactatttaatacaattcctat 386
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8720
Number of Sequences: 1807
Number of extensions: 8720
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 2
length of query: 1015
length of database: 10,358,551
effective HSP length: 16
effective length of query: 999
effective length of database: 10,329,639
effective search space: 10319309361
effective search space used: 10319309361
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)